As the leaves turn and the crisp air settles in, my kitchen fills with the comforting aroma of spiced pumpkin—a treasure of the autumn season. It’s time to embrace the warmth and joy of homemade cooking with my beloved recipe for Homemade Pumpkin Bagels with Honey Pecan Cream Cheese. These bagels not only celebrate the unique flavors of fall but also offer a fulfilling way to kick-start your day, making breakfast both delightful and comforting. Imagine sinking your teeth into a perfectly chewy bagel, complemented by a luscious cream cheese spread that harmonizes sweetness and crunch. Plus, they freeze beautifully, allowing you to enjoy this seasonal treat anytime! Ready to elevate your breakfast game this fall? Let’s dive into this scrumptious recipe!
Why are these bagels so special?
Homemade goodness: Nothing beats the satisfaction of baking your own bagels at home, perfect for bragging rights!
Fall flavors: Infused with pumpkin and warm spices, these bagels transport you straight to a cozy autumn morning.
Unique twist: The honey pecan cream cheese adds a delightful sweetness and crunch, elevating the traditional bagel experience.
Versatile treat: Enjoy them for breakfast, brunch, or even a snack – they shine on any occasion! For an even cozier beverage, pair them with a homemade Pumpkin Spice Latte.
Make-ahead magic: These bagels freeze beautifully, ensuring you can savor their flavors all season long without any hassle.
Pumpkin Bagels Ingredients
For the Bagels
• Warm Water (3/4 cup) – Activates the yeast; ensure it’s at about 115°F for optimal activation.
• Active Dry Yeast (1 packet/2 ¼ tsp) – Provides leavening; use fresh yeast for the best rise.
• Pumpkin Puree (1/2 cup) – Adds moisture and flavor; you can use homemade or canned.
• Brown Sugar (1/3 cup) – Sweetens and enhances flavor; pack it tightly for the best results.
• Bread Flour (3 cups) – Forms a chewy structure; all-purpose flour may alter the texture.
• Cinnamon (2 tsp) – Adds warmth to the flavor; feel free to adjust to your taste.
• Pumpkin Pie Spice (1 tsp) – Enhances the fall flavor theme; customize based on your preference.
• Coarse Kosher Sea Salt (1 1/4 tsp) – Balances flavors; using sea salt can improve taste.
• Baking Soda (1 tbsp) or Malt Extract – Important for boiling the bagels and achieving that perfect browning.
• Egg White (1, whisked with 1 tbsp water) – Gives bagels a shiny, golden crust.
• Unsalted Butter (4 tbsp, melted) – Adds richness; it’s optional but boosts flavor.
• Brown Sugar (6 tbsp, optional) – For topping; adds a sweet, crunchy finish.
For the Honey Pecan Cream Cheese Spread
• Cream Cheese (6 oz, softened) – Forms the smooth base for the spread.
• Honey (1 tbsp) – Sweetens the cream cheese; maple syrup is a fine substitute if desired.
• Vanilla Extract (1/4 tsp) – Adds depth to the flavor; it’s a little trick to make it shine.
• Cinnamon (1/4 tsp) – Enhances the cream cheese flavor; adjust to your liking.
• Coarse Kosher Sea Salt (pinch) – Complements the sweetness of the spread.
• Chopped Pecans (2 tbsp, toasted) – Adds delightful crunch; walnuts can be used instead or omitted for a nut-free version.
These delightful pumpkin bagels will fill your kitchen with the comforting aroma of fall flavors, making your mornings a little brighter!
Step‑by‑Step Instructions for Homemade Pumpkin Bagels with Honey Pecan Cream Cheese
Step 1: Proof Yeast
Begin by combining 3/4 cup of warm water (about 115°F), 1 packet of active dry yeast, and a pinch of brown sugar in a small bowl. Allow this mixture to sit for 5-10 minutes until it’s foamy on top, indicating that the yeast is activated and ready for baking your pumpkin bagels.
Step 2: Make Dough
In a large mixing bowl or stand mixer, mix together 1/2 cup of pumpkin puree and 1/3 cup of brown sugar until well combined. Next, stir in the proofed yeast mixture. This combination will form the wet base for your dough, making it flavorful and moist as you prepare for the next step in making these delightful pumpkin bagels.
Step 3: Mix Dry Ingredients
In a separate bowl, whisk together 3 cups of bread flour, 2 teaspoons of cinnamon, 1 teaspoon of pumpkin pie spice, and 1 1/4 teaspoons of coarse kosher sea salt. Gradually add this dry mixture to the wet ingredients, mixing until a slightly sticky dough forms. Use a dough hook to knead the dough for about 5 minutes until it’s smooth and elastic.
Step 4: First Rise
Transfer the kneaded dough to a greased bowl, covering it with a clean kitchen towel. Place it in a warm area and let it rise until doubled in size, approximately 1-2 hours. This resting period allows the flavors to develop, creating the perfect base for your pumpkin bagels.
Step 5: Shape Bagels
Once risen, punch down the dough gently to release the air. Divide the dough into 8 equal pieces using a bench scraper. Shape each piece into a bagel by rolling it into a ball and then poking a hole in the center, gently stretching it to form a ring. Let the shaped bagels rest for about 10 minutes, which helps them retain their shape during boiling.
Step 6: Chill
For enhanced flavor and texture, refrigerate the bagels for 8 hours or overnight. This optional step allows the dough to develop a deeper flavor, making your homemade pumpkin bagels even more delicious and worth the wait.
Step 7: Prepare Oven
Preheat your oven to 450°F. While the oven is heating, place a shallow dish filled with water on the bottom rack; this will create steam, helping to obtain that perfect bagel crust. Your kitchen will soon be filled with the warm, inviting scent of the upcoming bake!
Step 8: Boil Bagels
In a large pot, bring water to a boil and add 1 tablespoon of baking soda. Carefully drop the bagels into the boiling water, cooking them for 45 seconds on each side. This crucial step gives the bagels their characteristic chewy texture and glossy finish, preparing them beautifully for the oven.
Step 9: Bake
Using a slotted spoon, transfer the boiled bagels onto a parchment-lined baking sheet. Brush the tops with an egg wash made from 1 whisked egg white mixed with 1 tablespoon of water. Bake in the preheated oven for about 15 minutes until they are golden brown and exuding delicious aromas.
Step 10: Make Cream Cheese Spread
While the bagels are baking, prepare the honey pecan cream cheese spread. In a bowl, beat 6 ounces of softened cream cheese until fluffy, then mix in 1 tablespoon of honey, 1/4 teaspoon of vanilla extract, 1/4 teaspoon of cinnamon, a pinch of coarse kosher sea salt, and 2 tablespoons of toasted chopped pecans. This creamy spread will complement your pumpkin bagels perfectly, adding a layer of sweetness and crunch.
Pumpkin Bagels Variations & Substitutions
Feel free to customize these delightful pumpkin bagels to match your taste buds and dietary preferences!
- Sweet Potato: Substitute pumpkin puree with sweet potato puree for a different flavor profile. This swap provides a subtle sweetness that still embraces fall vibes.
- Nut-Free: Replace chopped pecans with sunflower seeds in the cream cheese spread to cater to nut allergies while still retaining crunch.
- Whole Wheat: Use whole wheat flour instead of bread flour for a heartier, nutty flavor in your bagels, making them a bit more wholesome.
- Spicy Twist: Add a pinch of cayenne or red pepper flakes to the dough for a mild heat that pairs wonderfully with the sweetness of the pumpkin.
- Fruit-Filled: Incorporate mini chocolate chips or dried cranberries into the dough for bursts of flavor, making each bite a delightful surprise.
- Vegan Option: Substitute the cream cheese with a vegan cream cheese alternative and replace the egg wash with almond milk for a plant-based bagel experience.
- Herb Infusion: Mix in fresh herbs like rosemary or thyme into the bagel dough for an unexpected savory depth, perfect for pairing with the sweet cream cheese spread.
- Gluten-Free: Use a gluten-free flour blend in place of bread flour, ensuring your bagels can be enjoyed by those with dietary restrictions.
For a cozy drink to accompany your bagels, consider trying a warming Pumpkin Spice Latte that enhances those delightful autumn flavors! Enjoy this journey of flavors, and let your creativity shine in your baking adventures!
Expert Tips for Pumpkin Bagels
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Check Your Yeast: Ensure your active dry yeast is fresh and the warm water is at the right temperature (around 115°F) to activate properly.
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Avoid Over-kneading: Knead the dough just until smooth and elastic, about 5 minutes. Over-kneading can lead to tough bagels.
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Boil with Care: When boiling your pumpkin bagels, don’t overcrowd the pot. This prevents them from cooking evenly or falling apart.
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Flavor Boost: For an enhanced pumpkin flavor, let the dough rest longer during the first rise. This improves texture and taste.
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Custom Cream Cheese: Feel free to change the type of nuts in the cream cheese spread; walnuts or almonds work wonderfully if you prefer a different crunch.
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Storage Tips: Store baked pumpkin bagels in an airtight container for up to 5 days, or freeze for longer enjoyment. Reheat by adding a few drops of water before microwaving.
How to Store and Freeze Pumpkin Bagels
Fridge: Keep your pumpkin bagels in an airtight container, where they will stay fresh for up to 5 days. This ensures they maintain their delightful texture and flavor.
Freezer: For longer storage, freeze the bagels individually wrapped in plastic wrap and then placed in a freezer bag. They can last for up to 3 months without losing their taste.
Reheating: To enjoy your frozen pumpkin bagels, simply remove them from the freezer and spritz lightly with water. Microwave for 30-60 seconds or warm them in the oven until heated through.
Cream Cheese Storage: Store any leftover honey pecan cream cheese spread in an airtight container in the fridge for up to a week.
Make Ahead Options
These Homemade Pumpkin Bagels with Honey Pecan Cream Cheese are perfect for busy mornings! You can prepare the dough up to 24 hours in advance by completing the first rise and shaping the bagels, then refrigerating them overnight to enhance their flavor and texture. When you’re ready to enjoy them, simply boil and bake the bagels as directed, which will ensure they turn out just as delicious. The cream cheese spread can also be made ahead—just mix it up and store it in an airtight container in the refrigerator for up to 3 days. This way, you’ll have a delightful breakfast option ready to go with minimal effort!
What to Serve with Homemade Pumpkin Bagels with Honey Pecan Cream Cheese
Elevate your fall breakfast by pairing these delightful bagels with complementary flavors and textures that will keep your mornings cozy and inviting.
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Warm Apple Cider: The comforting spice of warm apple cider enhances the cozy pumpkin flavors, making every sip a seasonal delight.
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Sautéed Spinach: A simple sauté of spinach adds a fresh, earthy contrast to the sweetness of the bagels, creating a balanced meal.
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Crispy Bacon: The salty crunch of bacon pairs wonderfully with the softness of the bagels and cream cheese, adding a savory edge to your breakfast.
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Maple Syrup Drizzle: A light drizzle of pure maple syrup over the cream cheese adds an additional layer of sweetness that harmonizes beautifully.
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Fresh Fruit Salad: A refreshing mix of seasonal fruits like pears, apples, and cranberries complements the bagels’ flavor, providing a bright, juicy contrast.
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Chai Latte: The aromatic spices in a chai latte mirror those in the bagels, creating a warm and fragrant experience to sip alongside your meal.
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Pecan Crumble Topping: Sprinkle some pecan crumble on top of your cream cheese for added crunch and a nutty flavor that ties everything together beautifully.
Homemade Pumpkin Bagels with Honey Pecan Cream Cheese Recipe FAQs
What type of pumpkin puree should I use?
You can use either homemade or canned pumpkin puree. If using canned, ensure it’s pure pumpkin without additives. This will give you the best flavor for your pumpkin bagels!
How do I store leftover pumpkin bagels?
Store your pumpkin bagels in an airtight container at room temperature for up to 5 days. This keeps them fresh and chewy, perfect for breakfast or snacks!
Can I freeze the pumpkin bagels?
Absolutely! To freeze, wrap each cooled bagel individually in plastic wrap, then place them in a freezer-safe bag. They can be stored for up to 3 months. When ready to enjoy, just spritz with a little water and microwave for 30-60 seconds, or warm them in the oven.
What should I do if my dough isn’t rising?
If your dough isn’t rising, check that your yeast is fresh and that the water used for proofing was around 115°F. If the yeast doesn’t activate (you’ll know it’s ready if it gets foamy), you’ll need to start over with fresh yeast for the best results!
Can I make this recipe gluten-free?
Yes! You can substitute the bread flour with a 1:1 gluten-free flour blend. However, this may alter the texture slightly, so be sure to follow the package instructions for best results.
Is there a nut-free option for the cream cheese spread?
Certainly! Simply omit the chopped pecans from the honey pecan cream cheese spread or replace them with sunflower seeds or pumpkin seeds for a delightful crunch that keeps it nut-free.

Pumpkin Bagels with Honey Pecan Cream Cheese to Delight Mornings
Ingredients
Equipment
Method
- Proof the yeast by combining warm water, active dry yeast, and brown sugar in a small bowl. Let sit for 5-10 minutes until foamy.
- In a large bowl, mix together pumpkin puree and brown sugar. Stir in the proofed yeast mixture.
- In a separate bowl, whisk together bread flour, cinnamon, pumpkin pie spice, and coarse kosher sea salt. Gradually add this to the wet ingredients until a sticky dough forms.
- Transfer the dough to a greased bowl, cover with a towel, and let rise in a warm area until doubled in size, about 1-2 hours.
- Punch down the dough and divide into 8 equal pieces. Shape each piece into a bagel and let rest for about 10 minutes.
- Refrigerate the bagels for 8 hours or overnight for enhanced flavor.
- Preheat the oven to 450°F. Place a shallow dish of water in the oven for steam.
- Boil water in a pot and add baking soda. Drop the bagels into boiling water, cooking for 45 seconds on each side.
- Transfer the boiled bagels to a lined baking sheet. Brush with egg wash and bake for 15 minutes until golden brown.
- Prepare the cream cheese spread by blending cream cheese, honey, vanilla extract, cinnamon, salt, and toasted pecans.
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